Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918047.1_cds_XP_016467564.1_60298
CDS Infomation

[gene=LOC107790177] [db_xref=GeneID:107790177] [protein=aspartyl protease family protein At5g10770-like] [protein_id=XP_016467564.1] [location=join(132794..132953,133505..134730)] [gbkey=CDS]
Sequence

ATGGCTTGGATCATTAAACATATTGTAACAATATGCTTCTTTTTGGGGTATTACCAAACA
CTGCCTATTTATGGAGAAACAATCAGAGCACCACCTCACTATAAGGTGGTTAATGTCAGC
TCTTTGGAGCCAAAACCCTACTGCCAGAGGTCAAGCTCAGGCTCGAAAATCGGATCGCAA
AAATTGGAGATCGTATCAAGATTTGGACCTTGCTTTCCAAATACTAGTCGAACGAAAACT
GCATCATCCAACGAACTTCTAAATTGGGATCAAGCTAGAGTTCGTTCAATCAATAAAAGA
GTGAATGACCATCTTTACAGTAACAGTCTTTCTGAGGATGGACTTGATCCAACTATTGAA
GGTAAGTATGAATTTGGGGGGGTCTATAATGTAAAGATAGGTCTTGGCACACCAAAACAA
GATTATTACTTAATGATGGATACTGGTAGCCAACCAACTTGGGTACGTTGCCAATCCTGC
ACCAAAGGTTGCAAATCAGAGAATCCTCTGTATGACCCTTCAAAATCCTCGACATATACA
AATAATACATCGGTTCCATTTCGTGTTGGTTATGGTGATAACTCATATACGAATGGCATT
TGGGGATGTGATACTCTCACTATAGAGGGTATTGGTGCAATAAACAACTTCCGATTTGGT
TGTGGCCAAGAAAATGTTGATGGAACTGGCAATAACTTTGGTGATGTAGCTGGAATACTT
GGACTTGGCAGAGGAGAGTTATCTTTTCCATCTCAAATTCAAAGTGCGTCATCAACGCAA
ATGTTTAGTTATTATGTCCCATTAACAAATAGCCATGTGGGAAATCTAGAATTTGGGAAT
GAAGCCAAGAAGAAATCTTACGCTTGTTCAAACCAATTTACACCATTGGTAAAAGGCCCC
GAACCAGTATTCTACTATCTTGACCTAGTTGGAATAAGTGTAGCTGGAAATAAACTCAAC
GTCACATCGACAACATTCACTAATGAAGGAACAGTTATAGACAGTGGAACGGTAATCACT
CGATTGCCACGAGCTGTATACTCTGCGTTTCGTGCTGCTTTTAGACAGTCGATGTCGAGT
TACACATTATTAGAAAATGTTGATGAGCTGATGGACACCTGCTACAGCTTCAAGGGATAC
GAACAAATTGTTTTACCAGAGATTAAATTCCATTTTGGAGAAGGAACTAGTACTACTACT
GATGTGAAGTTGTCAAACAATGGGATTTTATGGATGAAAGATGATAGAGTGAAGTGTTTG
GCTTTTGCTGCAAAGGAAAACGATGAGCATGTCAGCATTATTGGTTACGTTCAACAGCGG
GGATTCAATGTGCTTTATGATTTGGAAAGGGAAAGAATTGGGTTTGGCAGTAACTGCGCT
AGCTAG

Peptide Sequence

PEP ID

XP_016467564.1
PEP Infomation

PREDICTED: aspartyl protease family protein At5g10770-like [Nicotiana tabacum]
Sequence

MAWIIKHIVTICFFLGYYQTLPIYGETIRAPPHYKVVNVSSLEPKPYCQRSSSGSKIGSQ
KLEIVSRFGPCFPNTSRTKTASSNELLNWDQARVRSINKRVNDHLYSNSLSEDGLDPTIE
GKYEFGGVYNVKIGLGTPKQDYYLMMDTGSQPTWVRCQSCTKGCKSENPLYDPSKSSTYT
NNTSVPFRVGYGDNSYTNGIWGCDTLTIEGIGAINNFRFGCGQENVDGTGNNFGDVAGIL
GLGRGELSFPSQIQSASSTQMFSYYVPLTNSHVGNLEFGNEAKKKSYACSNQFTPLVKGP
EPVFYYLDLVGISVAGNKLNVTSTTFTNEGTVIDSGTVITRLPRAVYSAFRAAFRQSMSS
YTLLENVDELMDTCYSFKGYEQIVLPEIKFHFGEGTSTTTDVKLSNNGILWMKDDRVKCL
AFAAKENDEHVSIIGYVQQRGFNVLYDLERERIGFGSNCAS

Transcript Sequence

Gene sequence data has not been registered.